miRBase entry: ccr-mir-218a

Stem-loop ccr-mir-218a


Accession
MI0023372
Description
Cyprinus carpio ccr-mir-218a precursor miRNA
Gene family
MIPF0000026; mir-218


Sequence

ggugcagcugucucUUGUGCUUGAUCUAACCAUGUGccgccgccuacacaagccucacaugguuccgucaagcaccagggaccgcuggac
.((.((((.((((((.(((((((((..(((((((((..((...........))..)))))))))..))))))))).)))))).)))).))

Structure
g  g    u      U         CU         cc  cgcc 
 gu cagc gucucU GUGCUUGAU  AACCAUGUG  gc    u
 || |||| |||||| |||||||||  |||||||||  ||    a
 ca gucg caggga cacgaacug  uugguacac  cg    c
-  g    c      c         cc         uc  aaca 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ccr-miR-218a

Accession MIMAT0026271
Description Cyprinus carpio ccr-miR-218a mature miRNA
Sequence 15 - UUGUGCUUGAUCUAACCAUGUG - 36
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22303472
    Identification and profiling of microRNAs from skeletal muscle of the common carp
    Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
    PLoS One (2012) 7:e30925