Stem-loop ccr-mir-196a

Accession

MI0023357

Description

Cyprinus carpio ccr-mir-196a precursor miRNA

Gene family

MIPF0000031; mir-196

Literature search

2 open access papers mention ccr-mir-196a
(6 sentences)

Sequence

uggugcgugguuUAGGUAGUUUCAUGUUGUUGGGauuggcuucuuggcucgacaacaagaaacugccuugauuacgucaguuc
....((((((((.((((((((((.((((((((((...((...))...)))))))))).)))))))))).))))))))......

Structure

--uggu        U          A          auu  c 
      gcgugguu AGGUAGUUUC UGUUGUUGGG   gg  
      |||||||| |||||||||| ||||||||||   || u
      ugcauuag uccgucaaag acaacagcuc   uc  
cuugac        u          a          ggu  u 

Annotation confidence Not enough data

Genome context

Unknown

Mature ccr-miR-196a

• Accession: MIMAT0026253
• Description: Cyprinus carpio ccr-miR-196a mature miRNA
• Sequence: 13 - UAGGUAGUUUCAUGUUGUUGGG - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925