miRBase entry: ccr-mir-190

Stem-loop ccr-mir-190


Accession
MI0023353
Description
Cyprinus carpio ccr-mir-190 precursor miRNA
Gene family
MIPF0000076; mir-190

Literature search
1 open access papers mention ccr-mir-190
(1 sentences)

Sequence

accuggaagccuuucugcagggcucuguuUGAUAUGUUUGAUAUAUUAGGuuguuauucuguccaacuauauaucaaacauauuccuacaguguccugcucugucuccagacuugu
..(((((.((......(((((((.((((..((((((((((((((((..(((((..........)))))))))))))))))))))...)))).)))))))...)).)))))......

Structure
----ac     a  cuuucu       u    -uU                UA     uuau 
      cugga gc      gcagggc cugu   GAUAUGUUUGAUAUAU  GGuug    u
      ||||| ||      ||||||| ||||   ||||||||||||||||  |||||     
      gaccu ug      cguccug gaca   uuauacaaacuauaua  ucaac    c
uguuca     c  ---ucu       u    ucc                --     cugu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ccr-miR-190

Accession MIMAT0026249
Description Cyprinus carpio ccr-miR-190 mature miRNA
Sequence 30 - UGAUAUGUUUGAUAUAUUAGG - 50
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22303472
    Identification and profiling of microRNAs from skeletal muscle of the common carp
    Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
    PLoS One (2012) 7:e30925