miRBase entry: ccr-mir-15b

Stem-loop ccr-mir-15b


Accession
MI0023338
Description
Cyprinus carpio ccr-mir-15b precursor miRNA
Gene family
MIPF0000006; mir-15

Literature search
2 open access papers mention ccr-mir-15b
(2 sentences)

Sequence

cccagagugcccugUAGCAGCACAUCAUGGUUUGUaaguucuaagggcaaauuccaaauuaugaugugcugucacugggagccugggaguuu
(((((.((.(((.((.((((((((((((((((((.((((((...))))...)).)))))))))))))))))).)).))).))))))).....

Structure
-----     a  g   u  A                  U  ---    u 
     cccag gu ccc gU GCAGCACAUCAUGGUUUG aa   guuc  
     ||||| || ||| || |||||||||||||||||| ||   |||| a
     ggguc cg ggg ca ugucguguaguauuaaac uu   cggg  
uuuga     -  a   u  c                  c  aaa    a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ccr-miR-15b

Accession MIMAT0026232
Description Cyprinus carpio ccr-miR-15b mature miRNA
Sequence 15 - UAGCAGCACAUCAUGGUUUGU - 35
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22303472
    Identification and profiling of microRNAs from skeletal muscle of the common carp
    Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
    PLoS One (2012) 7:e30925