miRBase entry: ccr-mir-153c

Stem-loop ccr-mir-153c


Accession
MI0023335
Description
Cyprinus carpio ccr-mir-153c precursor miRNA
Gene family
MIPF0000050; mir-153


Sequence

cguagcacaccucccagugucauuuuugugauuugcagcuaguagucuggguccagUUGCAUAGUCACAAAAAUGAUCauugguagaugugagugca
.(((.((((.((.(((((((((((((((((((((((((((.(..........).))))))).)))))))))))))).)))))).)).))))..))).

Structure
c   -g    c  c      -              -       a uagu 
 gua  caca cu ccagug ucauuuuugugauu ugcagcu g    c
 |||  |||| || |||||| |||||||||||||| ||||||| |     
 cgu  gugu ga gguuaC AGUAAAAACACUGA ACGUUga c    u
a   ga    a  u      U              U       c uggg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ccr-miR-153c

Accession MIMAT0026230
Description Cyprinus carpio ccr-miR-153c mature miRNA
Sequence 57 - UUGCAUAGUCACAAAAAUGAUC - 78
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22303472
    Identification and profiling of microRNAs from skeletal muscle of the common carp
    Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
    PLoS One (2012) 7:e30925