Stem-loop ccr-mir-139

Accession

MI0023325

Description

Cyprinus carpio ccr-mir-139 precursor miRNA

Gene family

MIPF0000117; mir-139

Literature search

1 open access papers mention ccr-mir-139
(1 sentences)

Sequence

uguaguuuggucuggcuguauUCUACAGUGCAUGUGUCUCCAGUguuucuauggcgacuggggaggcagcgcuguuggaauaacagccagaaccucugaacaccga
....(((((((((((((((((((((((((((.(((.(((((((((((.....))).)))))))).))))))))).)))))).)))))))).)))...)))).....

Structure

-ugua    ---   -        -      -      A   G        -   u 
     guuu   ggu cuggcugu auUCUA CAGUGC UGU UCUCCAGU guu c
     ||||   ||| |||||||| |||||| |||||| ||| |||||||| ||| u
     caag   cca gaccgaca uaaggu gucgcg acg agggguca cgg a
agcca    ucu   a        a      u      -   g        g   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature ccr-miR-139

• Accession: MIMAT0026219
• Description: Cyprinus carpio ccr-miR-139 mature miRNA
• Sequence: 22 - UCUACAGUGCAUGUGUCUCCAGU - 44
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925