miRBase entry: ccr-mir-129

Stem-loop ccr-mir-129


Accession
MI0023316
Description
Cyprinus carpio ccr-mir-129 precursor miRNA
Gene family
MIPF0000073; mir-129


Sequence

ucccugucuuguccuuuucagguCUUUUUGCGGUCUGGGCUUGCuguuccuugaaccaguagccaggaagcccuuaccccaaaaaguaucugcagaggaccaaaaca
....(((.(((((((((.((((((((((((.(((..((((((.(((((.((......)).)).))).))))))..))).))))))).))))).)))))).))).)))

Structure
uccc   c   -      u     -       C   CU      G   -  c  ug 
    ugu uug uccuuu caggu CUUUUUG GGU  GGGCUU Cug uu cu  a
    ||| ||| |||||| ||||| ||||||| |||  |||||| ||| || ||   
    aca aac aggaga gucua gaaaaac cca  cccgaa gac ga ga  a
----   a   c      c     u       c   uu      g   c  u  cc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ccr-miR-129

Accession MIMAT0026209
Description Cyprinus carpio ccr-miR-129 mature miRNA
Sequence 24 - CUUUUUGCGGUCUGGGCUUGC - 44
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22303472
    Identification and profiling of microRNAs from skeletal muscle of the common carp
    Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
    PLoS One (2012) 7:e30925