Stem-loop ccr-mir-126

Accession

MI0023314

Description

Cyprinus carpio ccr-mir-126 precursor miRNA

Gene family

MIPF0000115; mir-126

Literature search

1 open access papers mention ccr-mir-126
(1 sentences)

Sequence

uuaucugcuucacagucCAUUAUUACUUUUGGUACGCGcuaggccagacucaaaCUCGUACCGUGAGUAAUAAUGCacuguggcag
....((((..((((((.(((((((((((.(((((((.(..((......))....).))))))).))))))))))).))))))))))

Structure

uuau    uu      c           U       C --cu  gc 
    cugc  cacagu CAUUAUUACUU UGGUACG G    ag  c
    ||||  |||||| ||||||||||| ||||||| |    ||   
    gacg  guguca GUAAUAAUGAG GCCAUGC C    uc  a
----    --      C           U       U aaac  ag 

Annotation confidence Not enough data

Genome context

Unknown

Mature ccr-miR-126-5p

• Accession: MIMAT0026206
• Description: Cyprinus carpio ccr-miR-126-5p mature miRNA
• Sequence: 18 - CAUUAUUACUUUUGGUACGCG - 38
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-126-3p

• Accession: MIMAT0026207
• Description: Cyprinus carpio ccr-miR-126-3p mature miRNA
• Sequence: 55 - CUCGUACCGUGAGUAAUAAUGC - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925