miRBase entry: ccr-mir-101a

Stem-loop ccr-mir-101a


Accession
MI0023304
Description
Cyprinus carpio ccr-mir-101a precursor miRNA
Gene family
MIPF0000046; mir-101

Literature search
2 open access papers mention ccr-mir-101a
(7 sentences)

Sequence

ggcugcccugguucaguuaucacagugcugaugcuguccaucuuaaaggUACAGUACUGUGAUAACUGAAGgauggcugcc
(((.(((....(((((((((((((((((((.((((............)))))))))))))))))))))))....))).)))

Structure
   u   cugg                   a    gucca 
ggc gcc    uucaguuaucacagugcug ugcu     u
||| |||    ||||||||||||||||||| ||||      
ccg cgg    AAGUCAAUAGUGUCAUGAC AUgg     c
   u   uagG                   -    aaauu 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature ccr-miR-101a

Accession MIMAT0026196
Description Cyprinus carpio ccr-miR-101a mature miRNA
Sequence 50 - UACAGUACUGUGAUAACUGAAG - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22303472
    Identification and profiling of microRNAs from skeletal muscle of the common carp
    Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
    PLoS One (2012) 7:e30925