Stem-loop ccr-mir-1

Accession

MI0023302

Description

Cyprinus carpio ccr-mir-1 precursor miRNA

Gene family

MIPF0000038; mir-1

Literature search

5 open access papers mention ccr-mir-1
(15 sentences)

Sequence

ugccuacuugguguacauacuucuuuaugugcccauaugaacauaugacagcuaUGGAAUGUAAAGAAGUAUGUAUucuuggucaggu
.(((((((.((.((((((((((((((((((..(((((...............))))).)))))))))))))))))).)).))).))))

Structure

u    -   u  u                  gc     ugaaca 
 gccu acu gg guacauacuucuuuaugu  ccaua      u
 |||| ||| || ||||||||||||||||||  |||||      a
 ugga ugg uc UAUGUAUGAAGAAAUGUA  GGUau      u
-    c   u  u                  -A     cgacag 

Annotation confidence Not enough data

Genome context

Unknown

Mature ccr-miR-1

• Accession: MIMAT0026194
• Description: Cyprinus carpio ccr-miR-1 mature miRNA
• Sequence: 55 - UGGAAUGUAAAGAAGUAUGUAU - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925