Stem-loop cme-MIR171f

Accession

MI0023270

Description

Cucumis melo cme-MIR171f precursor miRNA

Gene family

MIPF0000030; MIR171_1

Literature search

1 open access papers mention cme-MIR171f
(1 sentences)

Sequence

cucugauauuggcccgguucacucaaauacauaacauauucaucauuuacguuauauuUGAUUGAGCCGUGCCAAUAUCucaguauacu
((..(((((((((.(((((((.(((((((..((((.((.........)).))))))))))).))))))).)))))))))..))......

Structure

------  cu         c       c       ca    a  uuc 
      cu  gauauuggc cgguuca ucaaaua  uaac ua   a
      ||  ||||||||| ||||||| |||||||  |||| ||   u
      ga  CUAUAACCG GCCGAGU AGUuuau  auug au   c
ucauau  cu         U       U       --    c  uua 

Annotation confidence Not enough data

Genome context

Unknown

Mature cme-miR171f

• Accession: MIMAT0026166
• Description: Cucumis melo cme-miR171f mature miRNA
• Sequence: 59 - UGAUUGAGCCGUGCCAAUAUC - 79
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877