Stem-loop cme-MIR171a

Accession

MI0023223

Description

Cucumis melo cme-MIR171a precursor miRNA

Gene family

MIPF0000030; MIR171_1

Literature search

1 open access papers mention cme-MIR171a
(1 sentences)

Sequence

aagcgauauuggugagguucaaucugaagauggauuuuacaacgauugugaaguacgaucucUGAUUGAGCCGCGCCAAUAUCacuuuugua
(((.((((((((((.(((((((((.((.(((.((((((((((...))))))))).).))))).))))))))).)))))))))).))).....

Structure

-----   c          a         u  a   g -         c 
     aag gauauuggug gguucaauc ga gau g auuuuacaa  
     ||| |||||||||| ||||||||| || ||| | ||||||||| g
     uuc CUAUAACCGC CCGAGUUAG cu cua c ugaaguguu  
auguu   a          G         U  -   g a         a 

Annotation confidence Not enough data

Genome context

Unknown

Mature cme-miR171a

• Accession: MIMAT0026119
• Description: Cucumis melo cme-miR171a mature miRNA
• Sequence: 63 - UGAUUGAGCCGCGCCAAUAUC - 83
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877