Stem-loop cme-MIR169n

Accession

MI0023220

Description

Cucumis melo cme-MIR169n precursor miRNA

Gene family

MIPF0000012; MIR169_1

Literature search

1 open access papers mention cme-MIR169n
(1 sentences)

Sequence

cauguauugUAGCCAAGGAUGACUUGCCUGcagauugcaacuucaugaagggauuaucuacaaaaggcugccaucaaacccuguugugucauauccaugcaggcagucucuuuggcuaucaagaccgg
...((.(((((((((((((.((((.(((((((((........))......((((....(((((.(((.(........).))).)))))....)))).))))))))))))))))))))).))).))...

Structure

cau  a   -          U    U       gauugcaacuucaugaag    uauc     a   c gcc 
   gu uug UAGCCAAGGA GACU GCCUGca                  ggau    uacaa agg u   a
   || ||| |||||||||| |||| |||||||                  ||||    ||||| ||| |    
   ca aac aucgguuucu cuga cggacgu                  ccua    guguu ucc a   u
ggc  g   u          -    -       -----------------a    uacu     g   c aac 

Annotation confidence Not enough data

Genome context

Unknown

Mature cme-miR169n

• Accession: MIMAT0026116
• Description: Cucumis melo cme-miR169n mature miRNA
• Sequence: 10 - UAGCCAAGGAUGACUUGCCUG - 30
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877