miRBase entry: cme-MIR169i

Stem-loop cme-MIR169i


Accession
MI0023200
Description
Cucumis melo cme-MIR169i precursor miRNA
Gene family
MIPF0000012; MIR169_1

Literature search
1 open access papers mention cme-MIR169i
(1 sentences)

Sequence

auuguuugaUAGCCAAAAAUGACUUGCCUGCuaauucgaugagcaaaagagaucuauuuuuuauuacuuagaacuugaaugagcuucauuuucaggcaaucuuuuuggcuaaucuaacaag
.(((((.((((((((((((.((.(((((((..(((..((.(..((...(((.((((............)))).)))...))..).)))))..)))))))))))))))))).))).))))).

Structure
a     u   -         U  C       Cu   uc  u ag  aaa   a    uuuuu 
 uuguu gaU AGCCAAAAA GA UUGCCUG  aau  ga g  ca   gag ucua     u
 ||||| ||| ||||||||| || |||||||  |||  || |  ||   ||| ||||      
 aacaa cua ucgguuuuu cu aacggac  uua  cu c  gu   uuc agau     a
g     u   a         -  -       uu   --  u ga  aag   a    ucauu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature cme-miR169i

Accession MIMAT0026096
Description Cucumis melo cme-miR169i mature miRNA
Sequence 10 - UAGCCAAAAAUGACUUGCCUGC - 31
Evidence not_experimental

References

  1. PubMed ID: 22753475
    The genome of melon (Cucumis melo L.)
    "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
    "Proc Natl Acad Sci U S A (2012) 109:11872-11877