Stem-loop cme-MIR169k

Accession

MI0023183

Description

Cucumis melo cme-MIR169k precursor miRNA

Gene family

MIPF0000037; MIR169_2

Literature search

1 open access papers mention cme-MIR169k
(1 sentences)

Sequence

gagaguaaguaUGAGCCAAGGAUGACUUGCCUgcccuaauuuucuucaaagauaagcaauuaauucaucuucuuuucaaauuuguuugggaagucauccuuggcucauuuuuccucu
.((((.(((.((((((((((((((((((.((.((...(((((......(((((((........)).)))))......))))).))..)).)))))))))))))))))).))).))))

Structure

g    u   u                  G  -U  ccu     ucuuca     -  gca 
 agag aag aUGAGCCAAGGAUGACUU CC  gc   aauuu      aagau aa   a
 |||| ||| |||||||||||||||||| ||  ||   |||||      ||||| ||    
 ucuc uuu uacucgguuccuacugaa gg  ug   uuaaa      uucua uu   u
-    c   u                  g  uu  --u     cuuuuc     c  aau 

Annotation confidence Not enough data

Genome context

Unknown

Mature cme-miR169k

• Accession: MIMAT0026079
• Description: Cucumis melo cme-miR169k mature miRNA
• Sequence: 12 - UGAGCCAAGGAUGACUUGCCU - 32
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877