miRBase entry: mdm-MIR7127b

Stem-loop mdm-MIR7127b


Accession
MI0023169
Description
Malus domestica mdm-MIR7127b precursor miRNA
Gene family
MIPF0001408; MIR7127

Literature search
1 open access papers mention mdm-MIR7127b
(1 sentences)

Sequence

gaaucauuggaAUACUCAUCGAAUUUGUCAUAguguuucaguuguguuauggaaccaauuuuucucccacucccauacmuaccacccaauuaauggcacagcuagaacacucugacaaauuggaugaguwuuccaauaguc
.....(((((((.(((((((.(((((((((.(((((((.(((((((((((..........................................))))))))))).))))))).))))))))).))))))).)))))))....

Structure
gaauc       U       G         U       c           ggaaccaauuuuucucccac 
     auuggaA ACUCAUC AAUUUGUCA Aguguuu aguuguguuau                    u
     ||||||| ||||||| ||||||||| ||||||| |||||||||||                     
     uaaccuu ugaguag uuaaacagu ucacaag ucgacacggua                    c
-cuga       w       g         c       a           auuaacccaccaumcauacc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature mdm-miR7127b

Accession MIMAT0026065
Description Malus domestica mdm-miR7127b mature miRNA
Sequence 12 - AUACUCAUCGAAUUUGUCAUA - 32
Evidence experimental
miRNAseq [1]

References

  1. PubMed ID: 22704043
    Apple miRNAs and tasiRNAs with novel regulatory networks
    Xia R, Zhu H, An YQ, Beers EP, Liu Z
    Genome Biol (2012) 13:R47