miRBase entry: mdm-MIR7125

Stem-loop mdm-MIR7125


Accession
MI0023163
Description
Malus domestica mdm-MIR7125 precursor miRNA
Gene family
MIPF0001851; MIR7125

Literature search
3 open access papers mention mdm-MIR7125
(5 sentences)

Sequence

aaagcucucaaaugcaagcuaguuguaauaaguucaaucuuuuuauggccaguagugcccuaaauaagcauCGAACUUAUUGCAACUAGCUUuaauuuuugaguuuu
(((((((..((((..((((((((((((((((((((.(((((((((.((((....).))).)))).))).)).))))))))))))))))))))..))))..)))))))

Structure
       uc    gc                    a  -   -    u   - a 
aaagcuc  aaau  aagcuaguuguaauaaguuc au cuu uuua ggc c g
|||||||  ||||  |||||||||||||||||||| || ||| |||| ||| |  
uuuugag  uuua  UUCGAUCAACGUUAUUCAAG ua gaa aaau ccg g u
       uu    au                    C  c   u    c   u a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
MDC008558.180: 6437-6543 [+]

Database links

Mature mdm-miR7125

Accession MIMAT0026059
Description Malus domestica mdm-miR7125 mature miRNA
Sequence 72 - CGAACUUAUUGCAACUAGCUU - 92
Evidence experimental
miRNAseq [1]

References

  1. PubMed ID: 22704043
    Apple miRNAs and tasiRNAs with novel regulatory networks
    Xia R, Zhu H, An YQ, Beers EP, Liu Z
    Genome Biol (2012) 13:R47