miRBase entry: mdm-MIR7122b

Stem-loop mdm-MIR7122b


Accession
MI0023153
Description
Malus domestica mdm-MIR7122b precursor miRNA
Gene family
MIPF0000771; MIR1509


Sequence

ggguucauuccauucuuUUAUACAGAGAAAUCACGGUCGagaucaaaacucagaagucugucagauucucucucuccgucgucucaaccguguuuuucuguauaaagagauguacuggaucc
(((((((...((((.(((((((((((((((.((((((.(((((........((((((((...))))).))).........))))).))))))))))))))))))))).))))...)))))))

Structure
       uuc    c               U      C     -caaaacuc   -     g 
ggguuca   cauu uuUUAUACAGAGAAA CACGGU Gagau         aga agucu  
|||||||   |||| ||||||||||||||| |||||| |||||         ||| ||||| u
ccuaggu   guag gaaauaugucuuuuu gugcca cucug         ucu uuaga  
       cau    a               -      a     cugccucuc   c     c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
MDC022484.54: 139-260 [-]

Database links

Mature mdm-miR7122b

Accession MIMAT0026049
Description Malus domestica mdm-miR7122b mature miRNA
Sequence 18 - UUAUACAGAGAAAUCACGGUCG - 39
Evidence experimental
miRNAseq [1]

References

  1. PubMed ID: 22704043
    Apple miRNAs and tasiRNAs with novel regulatory networks
    Xia R, Zhu H, An YQ, Beers EP, Liu Z
    Genome Biol (2012) 13:R47