miRBase entry: mdm-MIR7121b

Stem-loop mdm-MIR7121b


Accession
MI0023145
Description
Malus domestica mdm-MIR7121b precursor miRNA
Gene family
MIPF0001376; MIR7121

Literature search
1 open access papers mention mdm-MIR7121b
(1 sentences)

Sequence

caauucccagaccugaccggagccgccguagaaauauuacuauuaccauccUCCUCUUGGUGAUCGCCCUGUcgcauauggcuucuggauucagggccuguacagggugauuaccaaagggaugacgguaauauuuaauucaugauguuggcaaacucgucggagggaaaug
...(((((....(((((.((.((((.(((......((((.(((((((.((.((((.((((((((((((((((.(((...((((.(((....)))))))))))))))))))))))))).)))).)).)))))))..)))).....))).))))...)).))))).)))))...

Structure
caa     agac     c  --a    c   agaaau    -c       a  c    C                c   uau    u   g 
   uuccc    cugac gg   gccg cgu      auua  uauuacc uc UCCU UUGGUGAUCGCCCUGU gca   ggcu cug a
   |||||    ||||| ||   |||| |||      ||||  ||||||| || |||| |||||||||||||||| |||   |||| |||  
   aaggg    ggcug uc   cggu gua      uaau  auaaugg ag aggg aaccauuagugggaca ugu   ccgg gac u
gua     ---a     c  aaa    u   -guacu    uu       c  u    a                -   ---    -   u 


Annotation confidence Not enough data
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Genome context
MDC009272.711: 1182-1353 [-]

Database links

Mature mdm-miR7121b

Accession MIMAT0026041
Description Malus domestica mdm-miR7121b mature miRNA
Sequence 52 - UCCUCUUGGUGAUCGCCCUGU - 72
Evidence experimental
miRNAseq [1]

References

  1. PubMed ID: 22704043
    Apple miRNAs and tasiRNAs with novel regulatory networks
    Xia R, Zhu H, An YQ, Beers EP, Liu Z
    Genome Biol (2012) 13:R47