Stem-loop sequence mdm-MIR828a

AccessionMI0023133 (change log)
DescriptionMalus domestica miR828a stem-loop
Gene family MIPF0000544; MIR828
Literature search

5 open access papers mention mdm-MIR828a
(97 sentences)

Stem-loop 
          u        u                 uc   --cca   uuu  cug    uu  a         a 
5' uccucuu guaauguu cuugcucaaaugaguau  cag     cag   gc   cagc  gc uauauauau u
   ||||||| |||||||| |||||||||||||||||  |||     |||   ||   ||||  || |||||||||  
3' aggagaa cauugcga gaacgaguuuacucgua  guc     guc   cg   gucg  cg auauauaua a
          -        c                 ga   uuaac   -uu  -ug    --  -         u
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates Overlapping transcripts
MDC012097.538: 5508-5649 [-]
intergenic
Database links

Mature sequence mdm-miR828a

Accession MIMAT0026029
Sequence

17 -  

ucuugcucaaaugaguauucca

 - 38

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Evidence experimental; miRNAseq [1]

References

1
PMID:22704043 "Apple miRNAs and tasiRNAs with novel regulatory networks" Xia R, Zhu H, An YQ, Beers EP, Liu Z Genome Biol. 13:R47(2012).