Stem-loop sequence mdm-MIR827

AccessionMI0023132 (change log)
DescriptionMalus domestica miR827 stem-loop
Gene family MIPF0001785; MIR827_4
Literature search

4 open access papers mention mdm-MIR827
(4 sentences)

Stem-loop 
   u     gca      a         c      c       uuccaugguuccauccaucugcuggcuucaauauauaauuuguguuugua 
5'  uugca   guggau uguuuguug ugguca cuaguua                                                  u
    |||||   |||||| ||||||||| |||||| |||||||                                                   
3'  aacgu   uacuua acaagcaac accagu gauuagu                                                  a
   g     -ag      c         u      a       cuugcaggcgguacccaguuuauauguuaugacguacauauauauguugu
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates Overlapping transcripts
MDC007691.315: 6054-6234 [+]
intergenic
Database links

Mature sequence mdm-miR827

Accession MIMAT0026028
Sequence

146 -  

uuagaugaccaucaacgaaca

 - 166

Get sequence
Evidence experimental; miRNAseq [1]

References

1
PMID:22704043 "Apple miRNAs and tasiRNAs with novel regulatory networks" Xia R, Zhu H, An YQ, Beers EP, Liu Z Genome Biol. 13:R47(2012).