miRBase entry: mdm-MIR535b

Stem-loop mdm-MIR535b


Accession
MI0023129
Description
Malus domestica mdm-MIR535b precursor miRNA
Gene family
MIPF0000136; MIR535

Literature search
5 open access papers mention mdm-MIR535b
(11 sentences)

Sequence

gauguugugUGACAAGGAGAGAGAGCACGCuugucaucacccaugaacggaucaugguuguuuacgggcgugcucucucuucuugucauacgguc
....((((((((((((((((((((((((((((((...((.((((((.....)))))).))...))))))))))))))))))))))))))))))..

Structure
gaug                              cau  c      a 
    uugugUGACAAGGAGAGAGAGCACGCuugu   ca ccauga c
    ||||||||||||||||||||||||||||||   || |||||| g
    ggcauacuguucuucucucucgugcgggca   gu gguacu g
--cu                              uuu  u      a 


Annotation confidence Not enough data
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Genome context
MDC005729.245: 16577-16671 [-]

Database links

Mature mdm-miR535b

Accession MIMAT0026025
Description Malus domestica mdm-miR535b mature miRNA
Sequence 10 - UGACAAGGAGAGAGAGCACGC - 30
Evidence experimental
miRNAseq [1]

References

  1. PubMed ID: 22704043
    Apple miRNAs and tasiRNAs with novel regulatory networks
    Xia R, Zhu H, An YQ, Beers EP, Liu Z
    Genome Biol (2012) 13:R47