Stem-loop mdm-MIR535a

Accession

MI0023128

Description

Malus domestica mdm-MIR535a precursor miRNA

Gene family

MIPF0000136; MIR535

Literature search

5 open access papers mention mdm-MIR535a
(11 sentences)

Sequence

gauguugugUGACAACGAGAGAGAGCACGCuugucaucacgcaugaaaggaucaugguuguuuacgggcgugcccucucuuguugucauucgguc
....(((.(((((((((((((((.((((((((((...((..(((((.....)))))..))...)))))))))).))))))))))))))).)))..

Structure

gaug   u               A          cau  cg     a 
    uug gUGACAACGAGAGAG GCACGCuugu   ca  cauga a
    ||| ||||||||||||||| ||||||||||   ||  ||||| g
    ggc uacuguuguucucuc cgugcgggca   gu  guacu g
--cu   u               c          uuu  ug     a 

Annotation confidence Not enough data

Genome context

MDC012353.216: 34184-34278 [+]

Mature mdm-miR535a

• Accession: MIMAT0026024
• Description: Malus domestica mdm-miR535a mature miRNA
• Sequence: 10 - UGACAACGAGAGAGAGCACGC - 30
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47