Stem-loop mdm-MIR482c

Accession

MI0023127

Description

Malus domestica mdm-MIR482c precursor miRNA

Gene family

MIPF0000403; MIR482

Literature search

4 open access papers mention mdm-MIR482c
(8 sentences)

Sequence

ggaauaggaaggcuuugaggagguuuauggaguggaaggguaggaaagaaguaacuuccuuuuurggucucaaauucuggagaucgaauuUCUUUCCUAACCCUCCCAUUCCuucaauuuccuaaagruuaucccuuuucc
((((.(((....((((.((((((((...(((((((.((((((((((((((((.............((((((........))))))..))))))))))).))))).)))))))...))))))))))))......))).))))

Structure

    u   --aagg    g        uau       a     -           aacuuccuuuuur      aaa 
ggaa agg      cuuu aggagguu   ggagugg agggu aggaaagaagu             ggucuc   u
|||| |||      |||| ||||||||   ||||||| ||||| |||||||||||             ||||||    
ccuu ucc      gaaa uccuuuaa   CCUUACC UCCCA UCCUUUCUuua             cuagag   u
    u   cuauur    -        cuu       C     A           -----------ag      guc 

Annotation confidence Not enough data

Genome context

Unknown

Mature mdm-miR482c

• Accession: MIMAT0026023
• Description: Malus domestica mdm-miR482c mature miRNA
• Sequence: 91 - UCUUUCCUAACCCUCCCAUUCC - 112
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47