Stem-loop mdm-MIR477a

Accession

MI0023125

Description

Malus domestica mdm-MIR477a precursor miRNA

Literature search

3 open access papers mention mdm-MIR477a
(5 sentences)

Sequence

ACUCUCCCUCAAGAGCUUCUCagcuuaaggcaauauguuauaccaagauccuuaguuugagggggauauuugguauauuuuaggcuguggagcucgagggggaga
.(((((((((..(((((((.((((((((((........(((((((((((((((........)))))).))))))))))))))))))).)))))))))))))))).

Structure

A         AA       U          caauaugu         -      agu 
 CUCUCCCUC  GAGCUUC Cagcuuaagg        uauaccaag auccuu   u
 |||||||||  ||||||| ||||||||||        ||||||||| ||||||    
 gagggggag  cucgagg gucggauuuu        auaugguuu uagggg   u
a         --       u          --------         a      gag 

Annotation confidence Not enough data

Genome context

MDC024949.20: 9404-9508 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mdm-MIR477a

Mature mdm-miR477a

• Accession: MIMAT0026021
• Description: Malus domestica mdm-miR477a mature miRNA
• Sequence: 1 - ACUCUCCCUCAAGAGCUUCUC - 21
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47