Stem-loop mdm-MIR2111b

Accession

MI0023119

Description

Malus domestica mdm-MIR2111b precursor miRNA

Gene family

MIPF0000754; MIR2111

Literature search

2 open access papers mention mdm-MIR2111b
(2 sentences)

Sequence

gauauuggguuaggauugggUAAUCUGCAUCCUGAGGUUUAgaucagcacacacguaacuguuguaucuaguccuugggaugcagauuaccuuguccucaccgccaaugc
..((((((((.(((((.((((((((((((((((((((.(((((((((((..........))))).)))))).)))))))))))))))))))).))))).))..)))))).

Structure

ga      --  u     u                    U      -     caca 
  uauugg  gu aggau gggUAAUCUGCAUCCUGAGG UUAgau cagca    c
  ||||||  || ||||| |||||||||||||||||||| |||||| |||||     
  guaacc  ca uccug uccauuagacguaggguucc gaucua guugu    g
-c      gc  c     u                    u      u     caau 

Annotation confidence Not enough data

Genome context

MDC000075.131: 9757-9866 [-]

Mature mdm-miR2111b

• Accession: MIMAT0026015
• Description: Malus domestica mdm-miR2111b mature miRNA
• Sequence: 21 - UAAUCUGCAUCCUGAGGUUUA - 41
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47