miRBase entry: mdm-MIR2111a

Stem-loop mdm-MIR2111a


Accession
MI0023118
Description
Malus domestica mdm-MIR2111a precursor miRNA
Gene family
MIPF0000754; MIR2111

Literature search
2 open access papers mention mdm-MIR2111a
(2 sentences)

Sequence

gguuaggauugggUAAUCUGCAUCCUGAGGUUUAgaucagcacacacguauuuguuguaucuaguccuugggaugcagauuaccuuguccuugcc
(((.(((((.((((((((((((((((((((.(((((((((((..........))))).)))))).)))))))))))))))))))).))))).)))

Structure
   u     u                    U      -     caca 
ggu aggau gggUAAUCUGCAUCCUGAGG UUAgau cagca    c
||| ||||| |||||||||||||||||||| |||||| |||||     
ccg uccug uccauuagacguaggguucc gaucua guugu    g
   u     u                    u      u     uuau 


Annotation confidence Not enough data
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Genome context
MDC000075.129: 2663-2757 [+]

Database links

Mature mdm-miR2111a

Accession MIMAT0026014
Description Malus domestica mdm-miR2111a mature miRNA
Sequence 14 - UAAUCUGCAUCCUGAGGUUUA - 34
Evidence experimental
miRNAseq [1]

References

  1. PubMed ID: 22704043
    Apple miRNAs and tasiRNAs with novel regulatory networks
    Xia R, Zhu H, An YQ, Beers EP, Liu Z
    Genome Biol (2012) 13:R47