Stem-loop sequence mdm-MIR397b

AccessionMI0023101 (change log)
DescriptionMalus domestica miR397b stem-loop
Gene family MIPF0000120; MIR397
Literature search

3 open access papers mention mdm-MIR397b
(10 sentences)

Stem-loop 
        u  --a        c    a                 --g    uau  c      au 
5' ccaga ug   agaaacau auug gugcagcguugaugaaa   uucg   ug uucuga  c
   ||||| ||   |||||||| |||| |||||||||||||||||   ||||   || ||||||  u
3' gguuu ac   ucuuugua uaac cacgucgcaacuacuuu   aagc   ac aggauu  u
        u  cua        u    c                 aca    --u  -      ac
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates Overlapping transcripts
MDC000270.326: 755-876 [+]
intergenic
Database links

Mature sequence mdm-miR397b

Accession MIMAT0025997
Sequence

20 -  

uugagugcagcguugaugaaa

 - 40

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Evidence experimental; miRNAseq [1]

References

1
PMID:22704043 "Apple miRNAs and tasiRNAs with novel regulatory networks" Xia R, Zhu H, An YQ, Beers EP, Liu Z Genome Biol. 13:R47(2012).