Stem-loop sequence mdm-MIR319b

AccessionMI0023072 (change log)
DescriptionMalus domestica miR319b stem-loop
Gene family MIPF0000010; MIR159
Literature search

4 open access papers mention mdm-MIR319b
(7 sentences)

Stem-loop 
   gc      ----g   a     uu          cuc     u   gg            a -  g   ag       uc  aa      --      a 
5'   aguggu     aag gagcu  cuucagucca   auggg ggc  uaggauuuaauu g cu ccg  ucauuca  ca  uacugg  guuauu g
     ||||||     ||| |||||  ||||||||||   ||||| |||  |||||||||||| | || |||  |||||||  ||  ||||||  |||||| u
3'   ucauua     uuc cucga  gaagucaggu   ugucc ucg  auucuagguuaa c ga ggc  aguaagu  gu  augacc  caguag a
   cu      auuaa   c     gg          uca     u   -a            a a  g   ga       gu  aa      ua      g
Get sequence
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates Overlapping transcripts
MDC008903.290: 17094-17286 [+]
intergenic
Database links

Mature sequence mdm-miR319b-5p

Accession MIMAT0037468
Sequence

14 -  

gagcuuucuucaguccacuc

 - 33

Get sequence
Evidence experimental; Illumina [2]

Mature sequence mdm-miR319b-3p

Accession MIMAT0025968
Sequence

159 -  

uuggacugaagggagcucccu

 - 179

Get sequence
Evidence experimental; miRNAseq [1]

References

1
PMID:22704043 "Apple miRNAs and tasiRNAs with novel regulatory networks" Xia R, Zhu H, An YQ, Beers EP, Liu Z Genome Biol. 13:R47(2012).
2
"Identification of apple miRNAs and their potential role in fire blight resistance" Kaja E, Szczesniak MW, Jensen PJ, Axtell MJ, McNellis T, Makalowska I Trees Genet Genomes. 11:812(2014).