miRBase entry: mdm-MIR171h

Stem-loop mdm-MIR171h


Accession
MI0023049
Description
Malus domestica mdm-MIR171h precursor miRNA
Gene family
MIPF0000030; MIR171_1

Literature search
9 open access papers mention mdm-MIR171h
(40 sentences)

Sequence

gauguuggaauggcucaaucaaauaaaaucucccaaaggauugggucuuuuaauuUGAUUGAGCCGUGCCAAUAUC
((((((((.(((((((((((((((.(((...(((((....)))))...))).))))))))))))))).))))))))

Structure
        a               a   ucu     a 
gauguugg auggcucaaucaaau aaa   cccaa g
|||||||| ||||||||||||||| |||   |||||  
CUAUAACC UGCCGAGUUAGUuua uuu   ggguu g
        G               a   ucu     a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
MDC021781.288: 48455-48530 [+]

Database links

Mature mdm-miR171h

Accession MIMAT0025945
Description Malus domestica mdm-miR171h mature miRNA
Sequence 56 - UGAUUGAGCCGUGCCAAUAUC - 76
Evidence experimental
miRNAseq [1]

References

  1. PubMed ID: 22704043
    Apple miRNAs and tasiRNAs with novel regulatory networks
    Xia R, Zhu H, An YQ, Beers EP, Liu Z
    Genome Biol (2012) 13:R47