Stem-loop mdm-MIR171g

Accession

MI0023048

Description

Malus domestica mdm-MIR171g precursor miRNA

Gene family

MIPF0000030; MIR171_1

Literature search

9 open access papers mention mdm-MIR171g
(40 sentences)

Sequence

gauguugguaugguucaaucaaauaaaaucucucaaaauuuggguccuuuaauuUGAUUGAGCCGUGCCAAUAUC
((((((((((((((((((((((((.(((...(((((...)))))...))).))))))))))))))))))))))))

Structure

                        a   ucu     a 
gauguugguaugguucaaucaaau aaa   cucaa  
|||||||||||||||||||||||| |||   ||||| a
CUAUAACCGUGCCGAGUUAGUuua uuu   ggguu  
                        a   ccu     u 

Annotation confidence Not enough data

Genome context

MDC016463.170: 5131-5205 [-]

Mature mdm-miR171g

• Accession: MIMAT0025944
• Description: Malus domestica mdm-miR171g mature miRNA
• Sequence: 55 - UGAUUGAGCCGUGCCAAUAUC - 75
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47