miRBase entry: mdm-MIR167i

Stem-loop mdm-MIR167i


Accession
MI0023034
Description
Malus domestica mdm-MIR167i precursor miRNA
Gene family
MIPF0000023; MIR167_1

Literature search
11 open access papers mention mdm-MIR167i
(197 sentences)

Sequence

ucaugcacugguagcgguUGAAGCUGCCAGCAUGAUCUUAuaacucccwacuucguuuagggaagaucagaucaucuggcaguuucaccuguuacugguagcauga
(((((((((((((((((.((((((((((((.(((((((.((...((((...........))))..)).))))))))))))))))))).))))))))))).))))))

Structure
      -           u            C       U  aac    wacu 
ucaugc acugguagcgg UGAAGCUGCCAG AUGAUCU Au   uccc    u
|||||| ||||||||||| |||||||||||| ||||||| ||   ||||    c
aguacg uggucauuguc acuuugacgguc uacuaga ua   aggg    g
      a           c            -       c  -ga    auuu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature mdm-miR167i

Accession MIMAT0025930
Description Malus domestica mdm-miR167i mature miRNA
Sequence 19 - UGAAGCUGCCAGCAUGAUCUUA - 40
Evidence experimental
miRNAseq [1]

References

  1. PubMed ID: 22704043
    Apple miRNAs and tasiRNAs with novel regulatory networks
    Xia R, Zhu H, An YQ, Beers EP, Liu Z
    Genome Biol (2012) 13:R47