Stem-loop mdm-MIR167a

Accession

MI0023026

Description

Malus domestica mdm-MIR167a precursor miRNA

Gene family

MIPF0000023; MIR167_1

Literature search

11 open access papers mention mdm-MIR167a
(237 sentences)

Sequence

ucaugcacugguagcgguugaagcugccagcaugaucuuauaacucccwacuucguuuagggaagaucAGAUCAUCUGGCAGUUUCACCuguuacugguagcauga
(((((((((((((((((.((((((((((((.(((((((.((...((((...........))))..)).))))))))))))))))))).))))))))))).))))))

Structure

      -           u            c       u  aac    wacu 
ucaugc acugguagcgg ugaagcugccag augaucu au   uccc    u
|||||| ||||||||||| |||||||||||| ||||||| ||   ||||    c
aguacg uggucauuguC ACUUUGACGGUC UACUAGA ua   aggg    g
      a           C            -       c  -ga    auuu 

Annotation confidence Not enough data

Genome context

MDC002483.224: 612-717 [+]

Mature mdm-miR167a

• Accession: MIMAT0025922
• Description: Malus domestica mdm-miR167a mature miRNA
• Sequence: 69 - AGAUCAUCUGGCAGUUUCACC - 89
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47