miRBase entry: mdm-MIR166c

Stem-loop mdm-MIR166c


Accession
MI0023019
Description
Malus domestica mdm-MIR166c precursor miRNA
Gene family
MIPF0000004; MIR166

Literature search
7 open access papers mention mdm-MIR166c
(35 sentences)

Sequence

aguuguggggaauguugucugguucgagaucuuucaauaaaacuugaagaucguuaucaucugaaugaucUCGGACCAGGCUUCAUUCCCCucaacu
(((((.((((((((..(((((((((((((((.((((........(((...)))........)))).)))))))))))))))..)))))))).)))))

Structure
     u        uu               u    auaaaacu   a 
aguug ggggaaug  gucugguucgagauc uuca        uga  
||||| ||||||||  ||||||||||||||| ||||        ||| g
ucaac CCCCUUAC  CGGACCAGGCUcuag aagu        gcu  
     u        UU               u    cuacuauu   a 


Annotation confidence Not enough data
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Genome context
MDC006536.318: 30433-30529 [+]

Database links

Mature mdm-miR166c

Accession MIMAT0025915
Description Malus domestica mdm-miR166c mature miRNA
Sequence 71 - UCGGACCAGGCUUCAUUCCCC - 91
Evidence experimental
miRNAseq [1]

References

  1. PubMed ID: 22704043
    Apple miRNAs and tasiRNAs with novel regulatory networks
    Xia R, Zhu H, An YQ, Beers EP, Liu Z
    Genome Biol (2012) 13:R47