Stem-loop sequence mdm-MIR164f

AccessionMI0023016 (change log)
DescriptionMalus domestica miR164f stem-loop
Gene family MIPF0000045; MIR164
Literature search

8 open access papers mention mdm-MIR164f
(39 sentences)

Stem-loop 
        a    ca         c  uu        uucga    -gu   c               u  gua    -------------    uuu 
5' gaugg gaag  gggcacgug au  cuaacuca     ucgc   aua ugagauauauaugua au   ugua             ugcu   u
   ||||| ||||  ||||||||| ||  ||||||||     ||||   ||| ||||||||||||||| ||   ||||             ||||    
3' cuacc cuuc  cccguguac ug  gauugagu     agug   uau acucuguguguauau ug   acau             acga   a
        c    uc         u  uu        -----    acc   -               u  --a    uauuuaagggucg    uuu
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates Overlapping transcripts
MDC031214.7: 16039-16208 [+]
intergenic
Database links

Mature sequence mdm-miR164f

Accession MIMAT0025912
Sequence

3 -  

uggagaagcagggcacgugca

 - 23

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Evidence experimental; miRNAseq [1]

References

1
PMID:22704043 "Apple miRNAs and tasiRNAs with novel regulatory networks" Xia R, Zhu H, An YQ, Beers EP, Liu Z Genome Biol. 13:R47(2012).