Stem-loop mdm-MIR164d

Accession

MI0023014

Description

Malus domestica mdm-MIR164d precursor miRNA

Gene family

MIPF0000045; MIR164

Literature search

8 open access papers mention mdm-MIR164d
(39 sentences)

Sequence

ugggugaguagcuccuguUGGAGAAGCAGGGCACGUGCAaauucuagcucaagcacuuccucccugggagcuuagcuuaagauuuaacaaagcuuugcacgugcuccccuucuccaacacaaguuucucaccuca
.(((((((.((((..(((((((((((..(((((((((((((.(((((((.((((..((((.....))))))))))))..)))...........)))))))))))))..)))))))))))..)))).)))))))..

Structure

-u       u    cc           CA             ----------u   --    c    ac    u 
  gggugag agcu  uguUGGAGAAG  GGGCACGUGCAaa           ucu  agcu aagc  uucc c
  ||||||| ||||  |||||||||||  |||||||||||||           |||  |||| ||||  |||| c
  uccacuc uuga  acaaccucuuc  cucgugcacguuu           aga  ucga uucg  aggg c
ac       u    ac           cc             cgaaacaauuu   au    -    --    u 

Annotation confidence Not enough data

Genome context

MDC010871.402: 12521-12655 [-]

Mature mdm-miR164d

• Accession: MIMAT0025910
• Description: Malus domestica mdm-miR164d mature miRNA
• Sequence: 19 - UGGAGAAGCAGGGCACGUGCA - 39
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47