Stem-loop mdm-MIR164c

Accession

MI0023013

Description

Malus domestica mdm-MIR164c precursor miRNA

Gene family

MIPF0000045; MIR164

Literature search

8 open access papers mention mdm-MIR164c
(39 sentences)

Sequence

gggugagacuccuuguUGGAGAAGCAGGGCACGUGCAaaccccauuggcuaugcuucaaaugcgagcgaauaaguuyuuugcacgugcucccccucuccaacacggguuccucaccu
(((((((...((((((((((((.(..(((((((((((((.(..(((.(((.(((.......)))))).)))..)...)))))))))))))..).))))))))).)))...)))))))

Structure

       acu   -         A CA             --c cc   g   a   uu 
gggugag   ccu uguUGGAGA G  GGGCACGUGCAaa   c  auu gcu ugc  c
|||||||   ||| ||||||||| |  |||||||||||||   |  ||| ||| |||  a
uccacuc   ggg acaaccucu c  cucgugcacguuu   g  uaa cga gcg  a
       cuu   c         c cc             yuu aa   g   -   ua 

Annotation confidence Not enough data

Genome context

MDC022516.233: 9079-9195 [+]

Mature mdm-miR164c

• Accession: MIMAT0025909
• Description: Malus domestica mdm-miR164c mature miRNA
• Sequence: 17 - UGGAGAAGCAGGGCACGUGCA - 37
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47