Stem-loop mdm-MIR160e

Accession

MI0023008

Description

Malus domestica mdm-MIR160e precursor miRNA

Gene family

MIPF0000032; MIR160

Literature search

8 open access papers mention mdm-MIR160e
(38 sentences)

Sequence

uaugUGCCUGGCUCCCUGUAUGCCAuuugcagaguuccaccgaacaucgauggccuccguggauggcguaugaggagccaugcauaua
(((((((.(((((((.((((((((((((((.(((..(((.(((...))).))).))).)))))))))))))).))))))).)))))))

Structure

       C       C              a   uu   c   a 
uaugUGC UGGCUCC UGUAUGCCAuuugc gag  cca cga  
||||||| ||||||| |||||||||||||| |||  ||| ||| c
auauacg accgagg guaugcgguaggug cuc  ggu gcu  
       u       a              c   -c   a   a 

Annotation confidence Not enough data

Genome context

MDC015910.528: 6786-6873 [-]

Mature mdm-miR160e

• Accession: MIMAT0025904
• Description: Malus domestica mdm-miR160e mature miRNA
• Sequence: 5 - UGCCUGGCUCCCUGUAUGCCA - 25
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47