Stem-loop sequence mdm-MIR156e

AccessionMI0022975 (change log)
DescriptionMalus domestica miR156e stem-loop
Gene family MIPF0000008; MIR156
Literature search

14 open access papers mention mdm-MIR156e
(298 sentences)

Stem-loop 
          a  -     -        a   ag  gg   uu    aa 
5' aguugac ga agaga gugagcac cac  gc  caa  guau  a
   ||||||| || ||||| |||||||| |||  ||  |||  ||||   
3' ucgacug cu ucucu cacucgug gug  cg  guu  caua  a
          c  c     u        c   -g  -g   uc    cu
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates Overlapping transcripts
MDC010428.318: 17260-17349 [-]
intergenic
Clustered miRNAs
< 10kb from mdm-MIR156e
mdm-MIR156eMDC010428.318: 17260-17349 [-]
mdm-MIR156hMDC010428.318: 7629-7722 [-]
Database links

Mature sequence mdm-miR156e

Accession MIMAT0025871
Sequence

4 -  

ugacagaagagagugagcac

 - 23

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Evidence experimental; miRNAseq [1]

References

1
PMID:22704043 "Apple miRNAs and tasiRNAs with novel regulatory networks" Xia R, Zhu H, An YQ, Beers EP, Liu Z Genome Biol. 13:R47(2012).