miRBase entry: mdm-MIR156c

Stem-loop mdm-MIR156c


Accession
MI0022973
Description
Malus domestica mdm-MIR156c precursor miRNA
Gene family
MIPF0000008; MIR156

Literature search
14 open access papers mention mdm-MIR156c
(303 sentences)

Sequence

guaguUGACAGAAGAGAGUGAGCACacacaggcagcaauuguauaaaaucauacccuugggcggugcgugcucaccucucucucugucagcugc
(((((((((((((((((((((((((.(((..((..(((..((((......))))..))).)).))).))))))).)))))).))))))))))))

Structure
            -      -       a   ag  ag   uu    aa 
guaguUGACAGA AGAGAG UGAGCAC cac  gc  caa  guau  a
|||||||||||| |||||| ||||||| |||  ||  |||  ||||   
cgucgacugucu ucucuc acucgug gug  cg  guu  caua  a
            c      c       c   -g  -g   cc    cu 


Annotation confidence Not enough data
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Genome context
MDC010428.308: 6929-7022 [+]

Database links

Mature mdm-miR156c

Accession MIMAT0025869
Description Malus domestica mdm-miR156c mature miRNA
Sequence 6 - UGACAGAAGAGAGUGAGCAC - 25
Evidence experimental
miRNAseq [1]

References

  1. PubMed ID: 22704043
    Apple miRNAs and tasiRNAs with novel regulatory networks
    Xia R, Zhu H, An YQ, Beers EP, Liu Z
    Genome Biol (2012) 13:R47