Stem-loop sequence mmu-mir-7083

Accession

MI0022933 (change log)

Symbol

MGI:Mir7083

Description

Mus musculus miR-7083 stem-loop

Stem-loop

   -- a     g   cu   caa      ac   u 
5'   g ggguc ggg  gga   gcagag  aug g
     | ||||| |||  |||   ||||||  |||  
3'   c cccag ucc  ucu   cgucuc  uac c
   ga -     g   --   ---      cc   u 

Deep sequencing

287 reads, 0 reads per million, 48 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (GRCm38; GCA_000001635.2): chr9: 21809941-21810000 [-]
• Overlapping transcripts:

  sense

  ENSMUST00000034728 ; Dock6-201; intron 39

Database links

• MGI:Mir7083
• miRBase Tracker:MI0022933

Mature sequence mmu-miR-7083-5p

• Accession: MIMAT0028072
• Sequence: 6 - ucggggcuggacaagcagaga - 26
• Deep sequencing: 276 reads, 45 experiments
• Evidence: experimental; meta-analysis [1]
• Predicted targets:
  • TargetScanVert:mmu-miR-7083-5p
  • miRDB:mmu-miR-7083-5p

Mature sequence mmu-miR-7083-3p

• Accession: MIMAT0028073
• Sequence: 41 - ucugcucuccuggaccccag - 60
• Deep sequencing: 4 reads, 4 experiments
• Evidence: experimental; meta-analysis [1]
• Predicted targets:
  • TargetScanVert:mmu-miR-7083-3p
  • miRDB:mmu-miR-7083-3p

References

1. PMID:22955976 "Discovery of hundreds of mirtrons in mouse and human small RNA data" Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC Genome Res. 22:1634-1645(2012).