Stem-loop sequence mmu-mir-7014

Accession

MI0022863 (change log)

Symbol

MGI:Mir7014

Description

Mus musculus miR-7014 stem-loop

Stem-loop

   agg  u   g  c        -   c    acc 
5'    cu ugg ug uguggaag gga agag   c
      || ||| || |||||||| ||| ||||    
3'    ga acc ac auacuuuc ccu ucuc   u
   ---  c   a  c        u   -    gag 

Deep sequencing

134 reads, 0 reads per million, 31 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (GRCm38; GCA_000001635.2): chr3: 95734911-95734973 [-]
• Overlapping transcripts:

  sense

  OTTMUST00000075067 ; Ecm1-010; exon 1

  OTTMUST00000075058 ; Ecm1-001; intron 9

  OTTMUST00000075059 ; Ecm1-002; intron 9

  ENSMUST00000144958 ; Ecm1-010; exon 1

  ENSMUST00000117507 ; Ecm1-001; intron 9

  ENSMUST00000029753 ; Ecm1-002; intron 9

Database links

• MGI:Mir7014
• miRBase Tracker:MI0022863

Mature sequence mmu-miR-7014-5p

• Accession: MIMAT0027932
• Sequence: 6 - uugggugcuguggaagggacag - 27
• Deep sequencing: 123 reads, 24 experiments
• Evidence: experimental; meta-analysis [1]
• Predicted targets:
  • TargetScanVert:mmu-miR-7014-5p
  • miRDB:mmu-miR-7014-5p

Mature sequence mmu-miR-7014-3p

• Accession: MIMAT0027933
• Sequence: 43 - ccucuuucauaccaaccacag - 63
• Evidence: experimental; meta-analysis [1]
• Predicted targets:
  • TargetScanVert:mmu-miR-7014-3p
  • miRDB:mmu-miR-7014-3p

References

1. PMID:22955976 "Discovery of hundreds of mirtrons in mouse and human small RNA data" Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC Genome Res. 22:1634-1645(2012).