miRBase entry: mmu-mir-6978

Stem-loop mmu-mir-6978


Accession
MI0022826
Symbol
MGI: Mir6978
Description
Mus musculus mmu-mir-6978 precursor miRNA


Sequence

179 reads, 12 reads per million, 22 experiments
aaaggAAGGGGUGAGAGAGAAGCUGGUGccauccACGGCUUCACUCUCACCCUGCAG
.......((((((((((.(((((((..........))))))).))))))))))....

Structure
aaaggAA          A       GUGc 
       GGGGUGAGAG GAAGCUG    c
       |||||||||| |||||||     
       UCCCACUCUC CUUCGGC    a
---GACG          A       Accu 


Annotation confidence Not enough data
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Genome context
chr17: 57217172-57217228 [-]

Database links

Mature mmu-miR-6978-5p

Accession MIMAT0027858
Description Mus musculus mmu-miR-6978-5p mature miRNA
Sequence 6 - AAGGGGUGAGAGAGAAGCUGGUG - 28
Evidence experimental
meta-analysis [1]

Mature mmu-miR-6978-3p

Accession MIMAT0027859
Description Mus musculus mmu-miR-6978-3p mature miRNA
Sequence 35 - ACGGCUUCACUCUCACCCUGCAG - 57
Evidence experimental
meta-analysis [1]

References

  1. PubMed ID: 22955976
    Discovery of hundreds of mirtrons in mouse and human small RNA data
    "Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC"
    "Genome Res (2012) 22:1634-1645