Stem-loop sequence mmu-mir-6966

AccessionMI0022814 (change log)
Symbol MGI:Mir6966
DescriptionMus musculus miR-6966 stem-loop
Stem-loop 
   ugucccuc     u   g        -  ca     ga 
5'         gggga gug acagcaca gc  ucuca  u
           ||||| ||| |||||||| ||  |||||   
3'         cuccu cgu ugucgugu cg  agagu  c
   ---gacgu     u   g        a  --     aa
Get sequence
Deep sequencing
174 reads, 0 reads per million, 48 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (GRCm38; GCA_000001635.2) Overlapping transcripts
chr17: 25780808-25780879 [+]
sense
OTTMUST00000085443 ; Narfl-002; intron 7
OTTMUST00000085442 ; Narfl-001; intron 7
OTTMUST00000085444 ; Narfl-003; exon 7
ENSMUST00000134108 ; Narfl-002; intron 7
ENSMUST00000002350 ; Narfl-001; intron 7
ENSMUST00000149645 ; Narfl-003; exon 7
antisense
OTTMUST00000085453 ; Haghl-005; intron 8
ENSMUST00000140738 ; Haghl-005; intron 8
Database links

Mature sequence mmu-miR-6966-5p

Accession MIMAT0027834
Sequence

6 -  

cucggggauguggacagcaca

 - 26

Get sequence
Deep sequencing138 reads, 40 experiments
Evidence experimental; meta-analysis [1]
Predicted targets

Mature sequence mmu-miR-6966-3p

Accession MIMAT0027835
Sequence

52 -  

ugcugugugcuuccucugcag

 - 72

Get sequence
Deep sequencing31 reads, 14 experiments
Evidence experimental; meta-analysis [1]
Predicted targets

References

1
PMID:22955976 "Discovery of hundreds of mirtrons in mouse and human small RNA data" Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC Genome Res. 22:1634-1645(2012).