miRBase entry: mmu-mir-6942

Stem-loop mmu-mir-6942


Accession
MI0022789
Symbol
MGI: Mir6942
Description
Mus musculus mmu-mir-6942 precursor miRNA


Sequence

156 reads, 6 reads per million, 41 experiments
gggccUAGGAGGAGGGGAACAUUUGCaacuauaguggcUUAUGGUUCUCUCCACCUCUCAg
(((...(((.((((((((.(((..((.((....)).))..))).)))))))).))))))..

Structure
--   ccU   A        A   UU  a  u 
  ggg   AGG GGAGGGGA CAU  GC ac a
  |||   ||| |||||||| |||  || ||  
  CUC   UCC CCUCUCUU GUA  cg ug u
gA   ---   A        G   UU  g  a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr13: 21396578-21396638 [-]

Database links

Mature mmu-miR-6942-5p

Accession MIMAT0027784
Description Mus musculus mmu-miR-6942-5p mature miRNA
Sequence 6 - UAGGAGGAGGGGAACAUUUGC - 26
Evidence experimental
meta-analysis [1]

Mature mmu-miR-6942-3p

Accession MIMAT0027785
Description Mus musculus mmu-miR-6942-3p mature miRNA
Sequence 39 - UUAUGGUUCUCUCCACCUCUCA - 60
Evidence experimental
meta-analysis [1]

References

  1. PubMed ID: 22955976
    Discovery of hundreds of mirtrons in mouse and human small RNA data
    "Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC"
    "Genome Res (2012) 22:1634-1645