Stem-loop sequence hsa-mir-6832

Accession

MI0022677 (change log)

Symbol

HGNC:MIR6832

Description

Homo sapiens miR-6832 stem-loop

Stem-loop

   gg   a u          aguu         ---g  aga 
5'   ugg g agagaggaaa    agggucagu    gc   g
     ||| | ||||||||||    |||||||||    ||    
3'   acc c uuucucuuuu    ucccagucg    cg   c
   -g   - -          ----         uaga  gac 

Deep sequencing

219 reads, 12.1 reads per million, 58 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr6: 31633787-31633858 [+]
• Overlapping transcripts:

  sense

  OTTHUMT00000076068 ; CSNK2B-004; intron 1

  OTTHUMT00000076063 ; CSNK2B-001; 3'UTR (exon 1)

  ENST00000375885 ; CSNK2B-004; intron 1

  ENST00000375882 ; CSNK2B-001; 3'UTR (exon 1)

  antisense

  OTTHUMT00000144445 ; GPANK1-003; 5'UTR (exon 1)

  ENST00000375906 ; GPANK1-003; 5'UTR (exon 1)

Database links

• HGNC:MIR6832
• miRBase Tracker:MI0022677

Mature sequence hsa-miR-6832-5p

• Accession: MIMAT0027564
• Sequence: 6 - aguagagaggaaaaguuaggguc - 28
• Deep sequencing: 159 reads, 33 experiments
• Evidence: experimental; meta-analysis [1]
• Predicted targets:
  • TargetScanVert:hsa-miR-6832-5p
  • miRDB:hsa-miR-6832-5p

Mature sequence hsa-miR-6832-3p

• Accession: MIMAT0027565
• Sequence: 53 - acccuuuuucucuuucccag - 72
• Deep sequencing: 44 reads, 26 experiments
• Evidence: experimental; meta-analysis [1]
• Predicted targets:
  • TargetScanVert:hsa-miR-6832-3p
  • miRDB:hsa-miR-6832-3p

References

1. PMID:22955976 "Discovery of hundreds of mirtrons in mouse and human small RNA data" Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC Genome Res. 22:1634-1645(2012).