Stem-loop sequence hsa-mir-6733

Accession

MI0022578 (change log)

Symbol

HGNC:MIR6733

Description

Homo sapiens miR-6733 stem-loop

Stem-loop

   gugcu       ga  a  u a      c u 
5'      ugggaaa  ca ac c gaguuc c u
        |||||||  || || | |||||| | c
3'      auccuuu  gu ug g cucgag g u
   ----g       ag  c  u a      u u 

Deep sequencing

296 reads, 0 reads per million, 91 experiments

Confidence

Annotation confidence: high

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Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr1: 43171652-43171712 [-]
• Overlapping transcripts:

  intergenic

Database links

• HGNC:MIR6733
• miRBase Tracker:MI0022578

Mature sequence hsa-miR-6733-5p

• Accession: MIMAT0027367
• Sequence: 6 - ugggaaagacaaacucagaguu - 27
• Deep sequencing: 252 reads, 85 experiments
• Evidence: experimental; meta-analysis [1]
• Predicted targets:
  • TargetScanVert:hsa-miR-6733-5p
  • miRDB:hsa-miR-6733-5p

Mature sequence hsa-miR-6733-3p

• Accession: MIMAT0027368
• Sequence: 42 - ucagugucuggauuuccuag - 61
• Deep sequencing: 24 reads, 17 experiments
• Evidence: experimental; meta-analysis [1]
• Predicted targets:
  • TargetScanVert:hsa-miR-6733-3p
  • miRDB:hsa-miR-6733-3p

References

1. PMID:22955976 "Discovery of hundreds of mirtrons in mouse and human small RNA data" Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC Genome Res. 22:1634-1645(2012).