miRBase entry: gga-mir-6563

Stem-loop gga-mir-6563


Accession
MI0022543
Description
Gallus gallus gga-mir-6563 precursor miRNA


Sequence

10 reads, 0 reads per million, 3 experiments
agcuacugacugcugcaucaGUUGGUCGGUUGUGCUUAGAGAuguuuauuuucaugucccACUGGGCACACUGUGACUGGCUACaugcagcacucaguuacuucagcucc
(((((((((.((((((((.(((((((((..(((((((((.(((((........)))))...)))))))))...)))))))))..)))))))).)))))......))))..

Structure
--    ------     c        -c         -GU         --A     uua 
  agcu      acuga ugcugcau  aGUUGGUCG   UGUGCUUAG   GAugu   u
  ||||      ||||| ||||||||  |||||||||   |||||||||   |||||    
  ucga      ugacu acgacgua  UCGGUCAGU   ACACGGGUC   cugua   u
cc    cuucau     c        CA         GUC         Acc     cuu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature gga-miR-6563-5p

Accession MIMAT0025834
Description Gallus gallus gga-miR-6563-5p mature miRNA
Sequence 21 - GUUGGUCGGUUGUGCUUAGAGA - 42
Evidence experimental
Illumina [1]

Mature gga-miR-6563-3p

Accession MIMAT0025835
Description Gallus gallus gga-miR-6563-3p mature miRNA
Sequence 61 - ACUGGGCACACUGUGACUGGCUAC - 84
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227