Stem-loop gga-mir-6686

Accession

MI0022507

Description

Gallus gallus gga-mir-6686 precursor miRNA

Sequence

cccucaccccucgcugcaggugaagcucgcuggggcugcucuguuugcugaaacacaagcaugcAGGGCAAUCCUGGAGACGCUGAcacacaucuaucaguaaaccagcc
............((((...(((.(((((.((((((.((((((((.((((........)))).)))))))).)))))).)).)))..)))................)))).

Structure

cccucaccccuc    -------------cag   -a   -  g      c        u    gaa 
            gcug                gug  agc uc cugggg ugcucugu ugcu   a
            ||||                |||  ||| || |||||| |||||||| ||||    
            cgac                cac  UCG AG GGUCCU ACGGGAcg acga   c
-----------c    caaaugacuaucuaca   AG   C  A      A        u    aca 

Annotation confidence Not enough data

Genome context

chr14: 759895-760004 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from gga-mir-6686

Mature gga-miR-6686-3p

• Accession: MIMAT0025792
• Description: Gallus gallus gga-miR-6686-3p mature miRNA
• Sequence: 65 - AGGGCAAUCCUGGAGACGCUGA - 86
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227