miRBase entry: gga-mir-6672

Stem-loop gga-mir-6672


Accession
MI0022492
Description
Gallus gallus gga-mir-6672 precursor miRNA


Sequence

3 reads, 1 reads per million, 2 experiments
gugaggacugagucagagauuggcaucccuuuucaguggugcccagugccaggacaaggggcagUGGGCACAAACUGGAAGACAggcggcuuugucugaacaccaggcag
.......(((..(((((.(..(((..((.((((((((.(((((((.((((.........)))).)))))))..))))))))...))..))).).)))))....)))....

Structure
gugagga   --ag     g uu   au  --c        -g       g    agg 
       cug    ucaga a  ggc  cc   uuuucagu  gugccca ugcc   a
       |||    ||||| |  |||  ||   ||||||||  ||||||| ||||   c
       gac    agucu u  ucg  gg   GAAGGUCA  CACGGGU acgg   a
---gacg   caca     g -u   gc  ACA        AA       g    gga 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr1: 112625566-112625675 [+]

Database links

Mature gga-miR-6672-3p

Accession MIMAT0025774
Description Gallus gallus gga-miR-6672-3p mature miRNA
Sequence 65 - UGGGCACAAACUGGAAGACA - 84
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227